This table contains the information on where the TFBS predictions are found, along with individual TFBS hit locations.
The table is preceded by a header section listing the TF name, JASPAR ID, structural class and family, taxonomic group, information content and GC content of the TFBS profile for the anchoring TF and the anchored (paired) TF.
The sequence ID for which the TFBS is predicted.
The anchoring TF name.
The start position of the predicted anchoring TFBS.
The end position of the predicted anchoring TFBS.
The chromosome strand on which the predicted anchoring TFBS is located.
The absolute score of the predicted binding site given the anchoring TFBS weight matrix profile.
The relative (percent) score of the predicted binding site given the anchoring TFBS weight matrix profile.
The predicted binding site sequence of the anchoring TFBS. Note that if the TFBS strand is given as negative, the sequence displayed corresponds to the antisense sequence.
The Anchored TF name (paired with the anchoring TF).
The start position of the predicted anchored TFBS.
The end position of the predicted anchored TFBS.
The chromosome strand on which the predicted anchored TFBS is located.
The absolute score of the predicted binding site given the anchored TFBS weight matrix profile.
The relative score of the predicted binding site given the anchored TFBS weight matrix profile.
The predicted binding site sequence of the anchored TFBS. Note that if the TFBS strand is given as negative, the sequence displayed corresponds to the antisense strand.
The distance between the anchoring TFBS and the anchored TFBS.