{% extends "base.html" %} {% load i18n %} {% load static %} {% load pagination_tags %} {% load get_genotype %} {% block title %}{% trans "View Individual" %}{% endblock %} {% block content %}
Name: {{ individual.name }}
Variants: {{ individual.n_variants }}
Novel Variants: {{ individual.novel_variants }} (Not in latest DbSNP Build)
Type | Total Variants | |
---|---|---|
{{ item.type }} | {{ item.total }} | {% for value in item.discrete %}{{ value.total }} {{ value.genotype }} | {% endfor %}
Type | Total Variants |
---|---|
{{ item.snpeff_effect }} | {{ item.snpeff_effect__count }} |
Type | Total Variants |
---|---|
{{ item.snpeff_func_class }} | {{ item.snpeff_func_class__count }} |
Type | Total Variants |
---|---|
{{ item.snpeff_impact }} | {{ item.snpeff_impact__count }} |
Type | Total Variants |
---|---|
{{ item.filter }} | {{ item.filter__count }} |
Quality | Value |
---|---|
Min | {{ individual.quality.qual__min }} |
Average | {{ individual.quality.qual__avg }} |
Max | {{ individual.quality.qual__max }} |
Read Depth | Value |
---|---|
Min | {{ individual.read_depth.read_depth__min }} |
Average | {{ individual.read_depth.read_depth__avg }} |
Max | {{ individual.read_depth.read_depth__max }} |
Type | Total Variants |
---|---|
{{ item.clinvar_clnsig }} | {{ item.total }} |
Chromossome | Total Variants |
---|---|
{{ item.chr }} | {{ item.total }} |
Genotype | Magnitude | Summary |
---|---|---|
{{ snpgenotype.genotype }} | {{ snpgenotype.magnitude }} | {{ snpgenotype.summary }} |
Genotype | Magnitude | Summary |
---|---|---|
{{ snpgenotype.genotype }} | {{ snpgenotype.magnitude }} | {{ snpgenotype.summary }} |