{% extends "site_base.html" %} {% load bootstrap_tags %} {% load humanize %} {% load static %} {% block extra_head %} {% endblock %} {% load i18n %} {% load sorting_tags %} {% load pagination_tags %} {% load filter_extras %} {% block head_title %}{% trans "Filter Analysis" %}{% endblock %} {% block body %}
Number of Variants: {{ summary.n_variants }}
Number of Genes: {{ summary.n_genes }}
{% anchor individual Individual %} | {% anchor chromossome Chr %} | {% anchor id RsId %} | {% anchor pos Pos %} | {% anchor qual Qual %} | {% anchor ref Ref %} | {% anchor alt Alt %} | {% anchor genotype Gen %} | {% anchor read_depth "Read Depth" %} | {% anchor snp_eff "Mutation Type"" %} | {% anchor snp_eff_functional_class "Protein Impact" %} | {% anchor impact "SnpEff Class" %} | {% anchor genomes1k_af "1kgenomes" %} | {% anchor dbsnp_gmaf "dbSNP137" %} | {% anchor ann_esp_maf "ESP6500" %} | {% anchor sift Sift %} | {% anchor polyphen Polyphen %} | Other Info |
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{{ gene.grouper }} |
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Omim - GeneCards - NCBI | |||||||||||||||||
{{ variant.individual }} | {{ variant.chromossome }} | {{ variant.variant_id }}
{% if variant.variant_id != "." %}
dbSNP |
{% endif %} {{ variant.pos }} | {{ variant.qual }} | {{ variant.ref }} | {{ variant.alt }} | {{ variant.genotype }} | {{ variant.read_depth }} | {{ variant.snp_eff|cleanstr }} | {{ variant.snp_eff_functional_class }} | {{ variant.impact }} | {% if variant.genomes1k_af != None %} {{ variant.genomes1k_af }} {% endif %} | {{ variant.gmaf_dbsnp135|floatformat:5|intcomma }} | {{ variant.ann_esp_maf|floatformat:5|intcomma }} | {{ variant.sift|floatformat:2 }} | {{ variant.polyphen|floatformat:2 }} | View More |