Nextflow workflow report
[${workflow.runName}] ${workflow.resume ? '(resumed run)' : ''}
<% if ( workflow.success && workflow.stats.ignoredCount ){ %>
Workflow execution completed successfully. One or more tasks reported an error condition.
<% } else if ( workflow.success ) { %>
Workflow execution completed successfully!
<% } else { %>
Workflow execution completed unsuccessfully!
The exit status of the task that caused the workflow execution to fail was: ${workflow.exitStatus}
.
The full error message was:
${workflow.errorReport}
<% } %>
- Run times
-
${workflow.start.format('dd-MMM-yyyy HH:mm:ss')} - ${workflow.complete.format('dd-MMM-yyyy HH:mm:ss')}
(duration: ${workflow.duration})
$workflow.stats.succeedCount succeeded
$workflow.stats.cachedCount cached
$workflow.stats.ignoredCount ignored
$workflow.stats.failedCount failed
- Nextflow command
${workflow.commandLine}
- CPU-Hours
- ${workflow.stats.computeTimeFmt}
- Launch directory
- ${workflow.launchDir}
- Work directory
- ${workflow.workDir.toUriString()}
- Project directory
- ${workflow.projectDir}
<% if (workflow.scriptName) { %>
- Script name
- ${workflow.scriptName}
<% } %>
<% if (workflow.scriptId) { %>
- Script ID
${workflow.scriptId}
<% } %>
- Workflow session
${workflow.sessionId}
<% if (workflow.repository) { %>
- Workflow repository
${workflow.repository}
, revision ${workflow.revision}
(commit hash ${workflow.commitId}
)
<% } %>
- Workflow profile
- ${workflow.profile}
<% if (workflow.container) { %>
- Workflow container
- ${workflow.container}
- Container engine
- ${workflow.containerEngine?:'-'}
<% } %>
- Nextflow version
- version ${workflow.nextflow.version}, build ${workflow.nextflow.build} (${workflow.nextflow.timestamp})