The exit status of the task that caused the workflow execution to fail was: ${workflow.exitStatus != null ? workflow.exitStatus : '-'}
.
The full error message was:
${workflow.errorReport ?: 'n/a'}
The command used to launch the workflow was as follows:
${workflow.commandLine}
Launch time | ${workflow.start.format('dd-MMM-yyyy HH:mm:ss')} |
Ending time | ${workflow.complete.format('dd-MMM-yyyy HH:mm:ss')} (duration: ${workflow.duration}) |
Total CPU-Hours | ${workflow.stats.computeTimeFmt ?: '-'} |
Tasks stats | Succeeded: ${workflow.stats.succeedCountFmt} Cached: ${workflow.stats.cachedCountFmt} Ignored: ${workflow.stats.ignoredCountFmt} Failed: ${workflow.stats.failedCountFmt} |
Launch directory | ${workflow.launchDir} |
Work directory | ${workflow.workDir.toUriString()} |
Project directory | ${workflow.projectDir} |
Script name | ${workflow.scriptName ?: '-'} |
Script ID | ${workflow.scriptId ?: '-'} |
Workflow session | ${workflow.sessionId} |
Workflow repo | ${workflow.repository ?: '-' } |
Workflow revision | ${workflow.repository ? "$workflow.revision ($workflow.commitId)" : '-'} |
Workflow profile | ${workflow.profile ?: '-'} |
Workflow container | ${workflow.container ?: '-'} |
Container engine | ${workflow.containerEngine?:'-'} |
Nextflow version | ${workflow.nextflow.version}, build ${workflow.nextflow.build} (${workflow.nextflow.timestamp}) |