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Packages that use ParamGroupCapable | |
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uk.ac.ebi.jmzidml.model | |
uk.ac.ebi.jmzidml.model.mzidml |
Uses of ParamGroupCapable in uk.ac.ebi.jmzidml.model |
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Classes in uk.ac.ebi.jmzidml.model that implement ParamGroupCapable | |
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class |
AbstractIdentifiableParamGroup
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class |
AbstractParamGroup
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Uses of ParamGroupCapable in uk.ac.ebi.jmzidml.model.mzidml |
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Classes in uk.ac.ebi.jmzidml.model.mzidml that implement ParamGroupCapable | |
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class |
AbstractContact
A contact is either a person or an organization. |
class |
AmbiguousResidue
Ambiguous residues e.g. |
class |
DBSequence
A database sequence from the specified SearchDatabase (nucleic acid or amino acid). |
class |
MassTable
The masses of residues used in the search. |
class |
Organization
Organizations are entities like companies, universities, government agencies. |
class |
Peptide
One (poly)peptide (a sequence with modifications). |
class |
PeptideEvidence
PeptideEvidence links a specific Peptide element to a specific position in a DBSequence. |
class |
Person
A person's name and contact details. |
class |
ProteinAmbiguityGroup
A set of logically related results from a protein detection, for example to represent conflicting assignments of peptides to proteins. |
class |
ProteinDetectionHypothesis
A single result of the ProteinDetection analysis (i.e. |
class |
ProteinDetectionList
The protein list resulting from a protein detection process. |
class |
Sample
A description of the sample analysed by mass spectrometry using CVParams or UserParams. |
class |
SourceFile
A file from which this mzIdentML instance was created. |
class |
SpectrumIdentificationItem
An identification of a single (poly)peptide, resulting from querying an input spectra, along with the set of confidence values for that identification. |
class |
SpectrumIdentificationList
Represents the set of all search results from SpectrumIdentification. |
class |
SpectrumIdentificationResult
All identifications made from searching one spectrum. |
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