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java.lang.Objectuk.ac.ebi.jmzidml.model.MzIdentMLObject
uk.ac.ebi.jmzidml.model.mzidml.Identifiable
uk.ac.ebi.jmzidml.model.mzidml.ExternalData
uk.ac.ebi.jmzidml.model.mzidml.SearchDatabase
public class SearchDatabase
A database for searching mass spectra. Examples include a set of amino acid sequence entries, or annotated spectra libraries.
Java class for SearchDatabaseType complex type.
The following schema fragment specifies the expected content contained within this class.
<complexType name="SearchDatabaseType"> <complexContent> <extension base="{http://psidev.info/psi/pi/mzIdentML/1.1}ExternalDataType"> <sequence> <element name="DatabaseName" type="{http://psidev.info/psi/pi/mzIdentML/1.1}ParamType"/> <element name="cvParam" type="{http://psidev.info/psi/pi/mzIdentML/1.1}CVParamType" maxOccurs="unbounded" minOccurs="0"/> </sequence> <attribute name="version" type="{http://www.w3.org/2001/XMLSchema}string" /> <attribute name="releaseDate" type="{http://www.w3.org/2001/XMLSchema}dateTime" /> <attribute name="numDatabaseSequences" type="{http://www.w3.org/2001/XMLSchema}long" /> <attribute name="numResidues" type="{http://www.w3.org/2001/XMLSchema}long" /> </extension> </complexContent> </complexType>
Field Summary | |
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protected List<CvParam> |
cvParam
|
protected Param |
databaseName
|
protected Long |
numDatabaseSequences
|
protected Long |
numResidues
|
protected Calendar |
releaseDate
|
protected String |
version
|
Fields inherited from class uk.ac.ebi.jmzidml.model.mzidml.ExternalData |
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externalFormatDocumentation, fileFormat, location |
Fields inherited from class uk.ac.ebi.jmzidml.model.mzidml.Identifiable |
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id, name |
Constructor Summary | |
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SearchDatabase()
|
Method Summary | |
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List<CvParam> |
getCvParam()
Gets the value of the cvParam property. |
Param |
getDatabaseName()
Gets the value of the databaseName property. |
Long |
getNumDatabaseSequences()
Gets the value of the numDatabaseSequences property. |
Long |
getNumResidues()
Gets the value of the numResidues property. |
Calendar |
getReleaseDate()
Gets the value of the releaseDate property. |
String |
getVersion()
Gets the value of the version property. |
void |
setDatabaseName(Param value)
Sets the value of the databaseName property. |
void |
setNumDatabaseSequences(Long value)
Sets the value of the numDatabaseSequences property. |
void |
setNumResidues(Long value)
Sets the value of the numResidues property. |
void |
setReleaseDate(Calendar value)
Sets the value of the releaseDate property. |
void |
setVersion(String value)
Sets the value of the version property. |
Methods inherited from class uk.ac.ebi.jmzidml.model.mzidml.ExternalData |
---|
getExternalFormatDocumentation, getFileFormat, getLocation, setExternalFormatDocumentation, setFileFormat, setLocation |
Methods inherited from class uk.ac.ebi.jmzidml.model.mzidml.Identifiable |
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getId, getName, setId, setName |
Methods inherited from class uk.ac.ebi.jmzidml.model.MzIdentMLObject |
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getHid |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
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protected Param databaseName
protected List<CvParam> cvParam
protected String version
protected Calendar releaseDate
protected Long numDatabaseSequences
protected Long numResidues
Constructor Detail |
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public SearchDatabase()
Method Detail |
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public Param getDatabaseName()
Param
public void setDatabaseName(Param value)
value
- allowed object is
Param
public List<CvParam> getCvParam()
This accessor method returns a reference to the live list,
not a snapshot. Therefore any modification you make to the
returned list will be present inside the JAXB object.
This is why there is not a set
method for the cvParam property.
For example, to add a new item, do as follows:
getCvParam().add(newItem);
Objects of the following type(s) are allowed in the list
CvParam
getCvParam
in interface CvParamListCapable
public String getVersion()
String
public void setVersion(String value)
value
- allowed object is
String
public Calendar getReleaseDate()
String
public void setReleaseDate(Calendar value)
value
- allowed object is
String
public Long getNumDatabaseSequences()
Long
public void setNumDatabaseSequences(Long value)
value
- allowed object is
Long
public Long getNumResidues()
Long
public void setNumResidues(Long value)
value
- allowed object is
Long
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