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java.lang.Objectuk.ac.ebi.jmzidml.model.MzIdentMLObject
uk.ac.ebi.jmzidml.model.mzidml.Identifiable
uk.ac.ebi.jmzidml.model.mzidml.ProteinDetectionList
public class ProteinDetectionList
The protein list resulting from a protein detection process.
Java class for ProteinDetectionListType complex type.
The following schema fragment specifies the expected content contained within this class.
<complexType name="ProteinDetectionListType"> <complexContent> <extension base="{http://psidev.info/psi/pi/mzIdentML/1.1}IdentifiableType"> <sequence> <element name="ProteinAmbiguityGroup" type="{http://psidev.info/psi/pi/mzIdentML/1.1}ProteinAmbiguityGroupType" maxOccurs="unbounded" minOccurs="0"/> <group ref="{http://psidev.info/psi/pi/mzIdentML/1.1}ParamGroup" maxOccurs="unbounded" minOccurs="0"/> </sequence> </extension> </complexContent> </complexType>
Field Summary | |
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protected List<AbstractParam> |
paramGroup
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protected List<ProteinAmbiguityGroup> |
proteinAmbiguityGroup
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Fields inherited from class uk.ac.ebi.jmzidml.model.mzidml.Identifiable |
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id, name |
Constructor Summary | |
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ProteinDetectionList()
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Method Summary | |
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List<CvParam> |
getCvParam()
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List<AbstractParam> |
getParamGroup()
Scores or output parameters associated with the whole ProteinDetectionList Gets the value of the paramGroup property. |
List<ProteinAmbiguityGroup> |
getProteinAmbiguityGroup()
Gets the value of the proteinAmbiguityGroup property. |
List<UserParam> |
getUserParam()
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Methods inherited from class uk.ac.ebi.jmzidml.model.mzidml.Identifiable |
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getId, getName, setId, setName |
Methods inherited from class uk.ac.ebi.jmzidml.model.MzIdentMLObject |
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getHid |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
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protected List<ProteinAmbiguityGroup> proteinAmbiguityGroup
protected List<AbstractParam> paramGroup
Constructor Detail |
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public ProteinDetectionList()
Method Detail |
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public List<ProteinAmbiguityGroup> getProteinAmbiguityGroup()
This accessor method returns a reference to the live list,
not a snapshot. Therefore any modification you make to the
returned list will be present inside the JAXB object.
This is why there is not a set
method for the proteinAmbiguityGroup property.
For example, to add a new item, do as follows:
getProteinAmbiguityGroup().add(newItem);
Objects of the following type(s) are allowed in the list
ProteinAmbiguityGroup
public List<AbstractParam> getParamGroup()
This accessor method returns a reference to the live list,
not a snapshot. Therefore any modification you make to the
returned list will be present inside the JAXB object.
This is why there is not a set
method for the paramGroup property.
For example, to add a new item, do as follows:
getParamGroup().add(newItem);
Objects of the following type(s) are allowed in the list
CvParam
UserParam
public List<CvParam> getCvParam()
getCvParam
in interface CvParamListCapable
getCvParam
in interface ParamGroupCapable
public List<UserParam> getUserParam()
getUserParam
in interface ParamGroupCapable
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