All Classes
AbstractContact
AbstractIdentifiableParamGroup
AbstractParam
AbstractParamGroup
AbstractParamUnitCvRefResolver
AbstractReferenceResolver
AbstractResolvingAdapter
AdapterObjectCache
AdditionalParamsCvParam
AdditionalParamsUserParam
AdditionalSearchParamsCvParam
AdditionalSearchParamsUserParam
Affiliation
AffiliationRefResolver
AmbiguousResidue
AmbiguousResidueCvParam
AmbiguousResidueUserParam
AnalysisCollection
AnalysisData
AnalysisParamsCvParam
AnalysisParamsUserParam
AnalysisProtocolCollection
AnalysisSampleCollection
AnalysisSoftware
AnalysisSoftwareAdapter
AnalysisSoftwareList
AuditCollection
BibliographicReference
CalendarAdapter
Constants
Constants.ReferencedType
ContactRole
ContactRoleRefResolver
Cv
CvAdapter
CvList
CvParam
CvParamCapable
CvParamListCapable
CvParamRefResolver
DatabaseFilters
DatabaseNameCvParam
DatabaseNameUserParam
DatabaseTranslation
DataCollection
DBSequence
DBSequenceAdapter
DBSequenceCvParam
DBSequenceRefResolver
DBSequenceUserParam
Enzyme
EnzymeNameCvParam
EnzymeNameUserParam
Enzymes
ExcludeCvParam
ExcludeUserParam
ExternalData
FacadeList
FileFormat
FileFormatCvParam
FileUtils
Filter
FilterTypeCvParam
FilterTypeUserParam
FragmentArray
FragmentArrayRefResolver
Fragmentation
FragmentationTable
Identifiable
IdentifiableMzIdentMLObject
IncludeCvParam
IncludeUserParam
Inputs
InputSpectra
InputSpectraRefResolver
InputSpectrumIdentifications
InputSpectrumIdentificationsRefResolver
IonType
IonTypeCvParam
JmzIdentMLParser
MarshallerFactory
MassTable
MassTableAdapter
MassTableCvParam
MassTableUserParam
Measure
MeasureAdapter
MeasureCvParam
ModelConstants
Modification
ModificationCvParam
ModificationParams
ModificationUserParam
ModParam
ModParamCvParam
MzIdentML
MzIdentMLElement
MzIdentMLElementConfig
MzIdentMLElementProperties
MzIdentMLIndexer
MzIdentMLIndexerFactory
MzIdentMLMarshaller
MzIdentMLNamespaceFilter
MzIdentMLObject
MzIdentMLObjectCache
MzIdentMLObjectIterator
MzIdentMLUnmarshaller
ObjectClassListener
ObjectFactory
Organization
OrganizationAdapter
OrganizationCvParam
OrganizationUserParam
Param
ParamCapable
ParamGroupCapable
ParamList
ParamListCapable
ParamListMappings
ParamMappings
ParamUpdater
ParentOrganization
ParentOrganizationRefResolver
Peptide
PeptideAdapter
PeptideCvParam
PeptideEvidence
PeptideEvidenceAdapter
PeptideEvidenceCvParam
PeptideEvidenceListCvParam
PeptideEvidenceListUserParam
PeptideEvidenceRef
PeptideEvidenceRefResolver
PeptideEvidenceResolver
PeptideEvidenceUserParam
PeptideHypothesis
PeptideHypothesisRefResolver
PeptideUserParam
Person
PersonCvParam
PersonUserParam
ProteinAmbiguityGroup
ProteinAmbiguityGroupCvParam
ProteinAmbiguityGroupUserParam
ProteinDetection
ProteinDetectionHypothesis
ProteinDetectionHypothesisCvParam
ProteinDetectionHypothesisRefResolver
ProteinDetectionHypothesisUserParam
ProteinDetectionList
ProteinDetectionListAdapter
ProteinDetectionListCvParam
ProteinDetectionListUserParam
ProteinDetectionProtocol
ProteinDetectionProtocolAdapter
ProteinDetectionProtocolRefResolver
ProteinDetectionRefResolver
ProtocolApplication
Provider
ProviderRefResolver
RawXMLListener
Residue
Role
RoleCvParam
Sample
SampleAdapter
SampleCvParam
SampleUserParam
SearchDatabase
SearchDatabaseAdapter
SearchDatabaseCvParam
SearchDatabaseRef
SearchDatabaseRefResolver
SearchModification
SearchTypeCvParam
SearchTypeUserParam
SequenceCollection
SoftwareNameCvParam
SoftwareNameUserParam
SourceFile
SourceFileCvParam
SourceFileUserParam
SpecificityRules
SpecificityRulesCvParam
SpectraData
SpectraDataAdapter
SpectrumIdentification
SpectrumIdentificationItem
SpectrumIdentificationItemCvParam
SpectrumIdentificationItemRef
SpectrumIdentificationItemRefRefResolver
SpectrumIdentificationItemRefResolver
SpectrumIdentificationItemUserParam
SpectrumIdentificationList
SpectrumIdentificationListAdapter
SpectrumIdentificationListCvParam
SpectrumIdentificationListUserParam
SpectrumIdentificationProtocol
SpectrumIdentificationProtocolAdapter
SpectrumIdentificationProtocolRefResolver
SpectrumIdentificationRefResolver
SpectrumIdentificationResult
SpectrumIdentificationResultCvParam
SpectrumIdentificationResultRefResolver
SpectrumIdentificationResultUserParam
SpectrumIDFormat
SpectrumIDFormatCvParam
SubSample
SubSampleRefResolver
SubstitutionModification
ThresholdCvParam
ThresholdUserParam
Tolerance
ToleranceCvParam
TranslationTable
TranslationTableAdapter
TranslationTableCvParam
UnmarshallerFactory
UserParam