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java.lang.Objectuk.ac.ebi.jmzidml.model.MzIdentMLObject
uk.ac.ebi.jmzidml.model.mzidml.AmbiguousResidue
public class AmbiguousResidue
Ambiguous residues e.g. X can be specified by the Code attribute and a set of parameters for example giving the different masses that will be used in the search.
Java class for AmbiguousResidueType complex type.
The following schema fragment specifies the expected content contained within this class.
<complexType name="AmbiguousResidueType"> <complexContent> <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> <sequence> <group ref="{http://psidev.info/psi/pi/mzIdentML/1.1}ParamGroup" maxOccurs="unbounded"/> </sequence> <attribute name="code" use="required" type="{http://psidev.info/psi/pi/mzIdentML/1.1}chars" /> </restriction> </complexContent> </complexType>
Field Summary | |
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protected String |
code
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protected List<AbstractParam> |
paramGroup
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Constructor Summary | |
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AmbiguousResidue()
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Method Summary | |
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String |
getCode()
Gets the value of the code property. |
List<CvParam> |
getCvParam()
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List<AbstractParam> |
getParamGroup()
Parameters for capturing e.g. |
List<UserParam> |
getUserParam()
|
void |
setCode(String value)
Sets the value of the code property. |
Methods inherited from class uk.ac.ebi.jmzidml.model.MzIdentMLObject |
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getHid |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
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protected List<AbstractParam> paramGroup
protected String code
Constructor Detail |
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public AmbiguousResidue()
Method Detail |
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public List<AbstractParam> getParamGroup()
This accessor method returns a reference to the live list,
not a snapshot. Therefore any modification you make to the
returned list will be present inside the JAXB object.
This is why there is not a set
method for the paramGroup property.
For example, to add a new item, do as follows:
getParamGroup().add(newItem);
Objects of the following type(s) are allowed in the list
CvParam
UserParam
public String getCode()
String
public void setCode(String value)
value
- allowed object is
String
public List<CvParam> getCvParam()
getCvParam
in interface CvParamListCapable
getCvParam
in interface ParamGroupCapable
public List<UserParam> getUserParam()
getUserParam
in interface ParamGroupCapable
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