uk.ac.ebi.jmzidml.model.mzidml
Class SpectrumIdentificationItemRef
java.lang.Object
uk.ac.ebi.jmzidml.model.MzIdentMLObject
uk.ac.ebi.jmzidml.model.mzidml.SpectrumIdentificationItemRef
- All Implemented Interfaces:
- Serializable
public class SpectrumIdentificationItemRef
- extends MzIdentMLObject
- implements Serializable
Reference(s) to the SpectrumIdentificationItem element(s) that support the given PeptideEvidence element. Using these references it is possible to indicate which spectra were actually accepted as evidence for this peptide identification in the given protein.
TODO marshalling/ persistor add validation to check for case where someone gets spectrumIdentificationItem and changes its id without updating ref id in
SpectrumIdentificationItemRef and other such clases.
NOTE: There is no setter method for the spectrumIdentificationItemRef. This simplifies keeping the spectrumIdentificationItem object reference and
spectrumIdentificationItemRef synchronized.
Java class for SpectrumIdentificationItemRefType complex type.
The following schema fragment specifies the expected content contained within this class.
<complexType name="SpectrumIdentificationItemRefType">
<complexContent>
<restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
<attribute name="spectrumIdentificationItem_ref" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
</restriction>
</complexContent>
</complexType>
- See Also:
- Serialized Form
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
spectrumIdentificationItemRef
protected String spectrumIdentificationItemRef
spectrumIdentificationItem
protected SpectrumIdentificationItem spectrumIdentificationItem
SpectrumIdentificationItemRef
public SpectrumIdentificationItemRef()
getSpectrumIdentificationItem
public SpectrumIdentificationItem getSpectrumIdentificationItem()
setSpectrumIdentificationItem
public void setSpectrumIdentificationItem(SpectrumIdentificationItem spectrumIdentificationItem)
getSpectrumIdentificationItemRef
public String getSpectrumIdentificationItemRef()
- Gets the value of the spectrumIdentificationItemRef property.
- Returns:
- possible object is
String
setSpectrumIdentificationItemRef
public void setSpectrumIdentificationItemRef(String value)
- Sets the value of the spectrumIdentificationItemRef property.
- Parameters:
value
- allowed object is
String
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