uk.ac.ebi.jmzidml.model.mzidml
Class ProteinDetectionProtocol

java.lang.Object
  extended by uk.ac.ebi.jmzidml.model.MzIdentMLObject
      extended by uk.ac.ebi.jmzidml.model.mzidml.Identifiable
          extended by uk.ac.ebi.jmzidml.model.mzidml.ProteinDetectionProtocol
All Implemented Interfaces:
Serializable, ParamListCapable

public class ProteinDetectionProtocol
extends Identifiable
implements Serializable, ParamListCapable

The parameters and settings of a ProteinDetection process.

Java class for ProteinDetectionProtocolType complex type.

The following schema fragment specifies the expected content contained within this class.

 <complexType name="ProteinDetectionProtocolType">
   <complexContent>
     <extension base="{http://psidev.info/psi/pi/mzIdentML/1.1}IdentifiableType">
       <sequence>
         <element name="AnalysisParams" type="{http://psidev.info/psi/pi/mzIdentML/1.1}ParamListType" minOccurs="0"/>
         <element name="Threshold" type="{http://psidev.info/psi/pi/mzIdentML/1.1}ParamListType"/>
       </sequence>
       <attribute name="analysisSoftware_ref" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
     </extension>
   </complexContent>
 </complexType>
 

See Also:
Serialized Form

Field Summary
protected  ParamList analysisParams
           
protected  AnalysisSoftware analysisSoftware
           
protected  String analysisSoftwareRef
           
protected  ParamList threshold
           
 
Fields inherited from class uk.ac.ebi.jmzidml.model.mzidml.Identifiable
id, name
 
Constructor Summary
ProteinDetectionProtocol()
           
 
Method Summary
 ParamList getAnalysisParams()
          Gets the value of the analysisParams property.
 AnalysisSoftware getAnalysisSoftware()
           
 String getAnalysisSoftwareRef()
          Gets the value of the analysisSoftwareRef property.
 ParamList getThreshold()
          Gets the value of the threshold property.
 void setAnalysisParams(ParamList value)
          Sets the value of the analysisParams property.
 void setAnalysisSoftware(AnalysisSoftware analysisSoftware)
           
 void setThreshold(ParamList value)
          Sets the value of the threshold property.
 
Methods inherited from class uk.ac.ebi.jmzidml.model.mzidml.Identifiable
getId, getName, setId, setName
 
Methods inherited from class uk.ac.ebi.jmzidml.model.MzIdentMLObject
getHid
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

analysisParams

protected ParamList analysisParams

threshold

protected ParamList threshold

analysisSoftwareRef

protected String analysisSoftwareRef

analysisSoftware

protected AnalysisSoftware analysisSoftware
Constructor Detail

ProteinDetectionProtocol

public ProteinDetectionProtocol()
Method Detail

getAnalysisParams

public ParamList getAnalysisParams()
Gets the value of the analysisParams property.

Returns:
possible object is ParamList

setAnalysisParams

public void setAnalysisParams(ParamList value)
Sets the value of the analysisParams property.

Parameters:
value - allowed object is ParamList

getThreshold

public ParamList getThreshold()
Gets the value of the threshold property.

Returns:
possible object is ParamList

setThreshold

public void setThreshold(ParamList value)
Sets the value of the threshold property.

Parameters:
value - allowed object is ParamList

getAnalysisSoftwareRef

public String getAnalysisSoftwareRef()
Gets the value of the analysisSoftwareRef property.

Returns:
possible object is String

getAnalysisSoftware

public AnalysisSoftware getAnalysisSoftware()

setAnalysisSoftware

public void setAnalysisSoftware(AnalysisSoftware analysisSoftware)


Copyright © 2012. All Rights Reserved.