uk.ac.ebi.jmzidml.model.mzidml
Class AnalysisData

java.lang.Object
  extended by uk.ac.ebi.jmzidml.model.MzIdentMLObject
      extended by uk.ac.ebi.jmzidml.model.mzidml.AnalysisData
All Implemented Interfaces:
Serializable

public class AnalysisData
extends MzIdentMLObject
implements Serializable

Data sets generated by the analyses, including peptide and protein lists.

Java class for AnalysisDataType complex type.

The following schema fragment specifies the expected content contained within this class.

 <complexType name="AnalysisDataType">
   <complexContent>
     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
       <sequence>
         <element name="SpectrumIdentificationList" type="{http://psidev.info/psi/pi/mzIdentML/1.1}SpectrumIdentificationListType" maxOccurs="unbounded"/>
         <element name="ProteinDetectionList" type="{http://psidev.info/psi/pi/mzIdentML/1.1}ProteinDetectionListType" minOccurs="0"/>
       </sequence>
     </restriction>
   </complexContent>
 </complexType>
 

See Also:
Serialized Form

Field Summary
protected  ProteinDetectionList proteinDetectionList
           
protected  List<SpectrumIdentificationList> spectrumIdentificationList
           
 
Constructor Summary
AnalysisData()
           
 
Method Summary
 ProteinDetectionList getProteinDetectionList()
          Gets the value of the proteinDetectionList property.
 List<SpectrumIdentificationList> getSpectrumIdentificationList()
          Gets the value of the spectrumIdentificationList property.
 void setProteinDetectionList(ProteinDetectionList value)
          Sets the value of the proteinDetectionList property.
 
Methods inherited from class uk.ac.ebi.jmzidml.model.MzIdentMLObject
getHid
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

spectrumIdentificationList

protected List<SpectrumIdentificationList> spectrumIdentificationList

proteinDetectionList

protected ProteinDetectionList proteinDetectionList
Constructor Detail

AnalysisData

public AnalysisData()
Method Detail

getSpectrumIdentificationList

public List<SpectrumIdentificationList> getSpectrumIdentificationList()
Gets the value of the spectrumIdentificationList property.

This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the spectrumIdentificationList property.

For example, to add a new item, do as follows:

    getSpectrumIdentificationList().add(newItem);
 

Objects of the following type(s) are allowed in the list SpectrumIdentificationList

Returns:
spectrumIdentificationList A list of spectrum identifications.

getProteinDetectionList

public ProteinDetectionList getProteinDetectionList()
Gets the value of the proteinDetectionList property.

Returns:
possible object is ProteinDetectionList

setProteinDetectionList

public void setProteinDetectionList(ProteinDetectionList value)
Sets the value of the proteinDetectionList property.

Parameters:
value - allowed object is ProteinDetectionList


Copyright © 2012. All Rights Reserved.