uk.ac.ebi.jmzidml.model.mzidml
Class CvParam
java.lang.Object
uk.ac.ebi.jmzidml.model.MzIdentMLObject
uk.ac.ebi.jmzidml.model.mzidml.AbstractParam
uk.ac.ebi.jmzidml.model.mzidml.CvParam
- All Implemented Interfaces:
- Serializable
- Direct Known Subclasses:
- AdditionalParamsCvParam, AdditionalSearchParamsCvParam, AmbiguousResidueCvParam, AnalysisParamsCvParam, DatabaseNameCvParam, DBSequenceCvParam, EnzymeNameCvParam, ExcludeCvParam, FileFormatCvParam, FilterTypeCvParam, IncludeCvParam, IonTypeCvParam, MassTableCvParam, MeasureCvParam, ModificationCvParam, ModParamCvParam, OrganizationCvParam, PeptideCvParam, PeptideEvidenceCvParam, PeptideEvidenceListCvParam, PersonCvParam, ProteinAmbiguityGroupCvParam, ProteinDetectionHypothesisCvParam, ProteinDetectionListCvParam, RoleCvParam, SampleCvParam, SearchDatabaseCvParam, SearchTypeCvParam, SoftwareNameCvParam, SourceFileCvParam, SpecificityRulesCvParam, SpectrumIdentificationItemCvParam, SpectrumIdentificationListCvParam, SpectrumIdentificationResultCvParam, SpectrumIDFormatCvParam, ThresholdCvParam, ToleranceCvParam, TranslationTableCvParam
public class CvParam
- extends AbstractParam
- implements Serializable
A single entry from an ontology or a controlled
vocabulary.
TODO marshalling/ persistor add validation to check for case where someone gets cv and changes its id without updating ref id in
CvParam and other such clases.
NOTE: There is no setter method for the cvRef. This simplifies keeping the cv object reference and
cvRef synchronized.
Java class for CVParamType complex type.
The following schema fragment specifies the expected content contained within this class.
<complexType name="CVParamType">
<complexContent>
<extension base="{http://psidev.info/psi/pi/mzIdentML/1.1}AbstractParamType">
<attribute name="cvRef" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
<attribute name="accession" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
</extension>
</complexContent>
</complexType>
- See Also:
- Serialized Form
Methods inherited from class uk.ac.ebi.jmzidml.model.mzidml.AbstractParam |
getName, getUnitAccession, getUnitCv, getUnitCvRef, getUnitName, getValue, setName, setUnitAccession, setUnitCv, setUnitName, setValue |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
cvRef
protected String cvRef
accession
protected String accession
cv
protected Cv cv
CvParam
public CvParam()
getCv
public Cv getCv()
setCv
public void setCv(Cv cv)
getCvRef
public String getCvRef()
- Gets the value of the cvRef property.
- Returns:
- possible object is
String
getAccession
public String getAccession()
- Gets the value of the accession property.
- Returns:
- possible object is
String
setAccession
public void setAccession(String value)
- Sets the value of the accession property.
- Parameters:
value
- allowed object is
String
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