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Packages that use AbstractParam | |
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uk.ac.ebi.jmzidml.model.mzidml | |
uk.ac.ebi.jmzidml.model.mzidml.params | |
uk.ac.ebi.jmzidml.xml.jaxb.resolver |
Uses of AbstractParam in uk.ac.ebi.jmzidml.model.mzidml |
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Subclasses of AbstractParam in uk.ac.ebi.jmzidml.model.mzidml | |
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class |
CvParam
A single entry from an ontology or a controlled vocabulary. |
class |
UserParam
A single user-defined parameter. |
Fields in uk.ac.ebi.jmzidml.model.mzidml declared as AbstractParam | |
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protected AbstractParam |
Param.paramGroup
|
Fields in uk.ac.ebi.jmzidml.model.mzidml with type parameters of type AbstractParam | |
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protected List<AbstractParam> |
SpectrumIdentificationResult.paramGroup
|
protected List<AbstractParam> |
SpectrumIdentificationList.paramGroup
|
protected List<AbstractParam> |
SpectrumIdentificationItem.paramGroup
|
protected List<AbstractParam> |
SourceFile.paramGroup
|
protected List<AbstractParam> |
Sample.paramGroup
|
protected List<AbstractParam> |
ProteinDetectionList.paramGroup
|
protected List<AbstractParam> |
ProteinDetectionHypothesis.paramGroup
|
protected List<AbstractParam> |
ProteinAmbiguityGroup.paramGroup
|
protected List<AbstractParam> |
PeptideEvidence.paramGroup
|
protected List<AbstractParam> |
Peptide.paramGroup
|
protected List<AbstractParam> |
ParamList.paramGroup
|
protected List<AbstractParam> |
MassTable.paramGroup
|
protected List<AbstractParam> |
DBSequence.paramGroup
|
protected List<AbstractParam> |
AmbiguousResidue.paramGroup
|
protected List<AbstractParam> |
AbstractContact.paramGroup
|
Methods in uk.ac.ebi.jmzidml.model.mzidml that return types with arguments of type AbstractParam | |
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List<AbstractParam> |
SpectrumIdentificationResult.getParamGroup()
Scores or parameters associated with the SpectrumIdentificationResult (i.e the set of SpectrumIdentificationItems derived from one spectrum) e.g. |
List<AbstractParam> |
SpectrumIdentificationList.getParamGroup()
Scores or output parameters associated with the SpectrumIdentificationList.Gets the value of the paramGroup property. |
List<AbstractParam> |
SpectrumIdentificationItem.getParamGroup()
Scores or attributes associated with the SpectrumIdentificationItem e.g. |
List<AbstractParam> |
SourceFile.getParamGroup()
Any additional parameters description the source file.Gets the value of the paramGroup property. |
List<AbstractParam> |
Sample.getParamGroup()
The characteristics of a Material.Gets the value of the paramGroup property. |
List<AbstractParam> |
ProteinDetectionList.getParamGroup()
Scores or output parameters associated with the whole ProteinDetectionList Gets the value of the paramGroup property. |
List<AbstractParam> |
ProteinDetectionHypothesis.getParamGroup()
Scores or parameters associated with this ProteinDetectionHypothesis e.g. |
List<AbstractParam> |
ProteinAmbiguityGroup.getParamGroup()
Scores or parameters associated with the ProteinAmbiguityGroup.Gets the value of the paramGroup property. |
List<AbstractParam> |
PeptideEvidence.getParamGroup()
Additional parameters or descriptors for the PeptideEvidence.Gets the value of the paramGroup property. |
List<AbstractParam> |
Peptide.getParamGroup()
Additional descriptors of this peptide sequence Gets the value of the paramGroup property. |
List<AbstractParam> |
ParamList.getParamGroup()
Gets the value of the paramGroup property. |
List<AbstractParam> |
MassTable.getParamGroup()
Additional parameters or descriptors for the MassTable.Gets the value of the paramGroup property. |
List<AbstractParam> |
DBSequence.getParamGroup()
Additional descriptors for the sequence, such as taxon, description line etc.Gets the value of the paramGroup property. |
List<AbstractParam> |
AmbiguousResidue.getParamGroup()
Parameters for capturing e.g. |
List<AbstractParam> |
AbstractContact.getParamGroup()
Attributes of this contact such as address, email, telephone etc.Gets the value of the paramGroup property. |
Methods in uk.ac.ebi.jmzidml.model.mzidml with parameters of type AbstractParam | |
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void |
Param.setParam(AbstractParam value)
Sets the value of the paramGroup property. |
Uses of AbstractParam in uk.ac.ebi.jmzidml.model.mzidml.params |
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Subclasses of AbstractParam in uk.ac.ebi.jmzidml.model.mzidml.params | |
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class |
AdditionalParamsCvParam
User: gokelly Date: 11/04/11 Time: 14:46 |
class |
AdditionalParamsUserParam
User: gokelly Date: 11/04/11 Time: 14:47 |
class |
AdditionalSearchParamsCvParam
User: gokelly Date: 11/04/11 Time: 15:30 |
class |
AdditionalSearchParamsUserParam
User: gokelly Date: 11/04/11 Time: 15:31 |
class |
AmbiguousResidueCvParam
|
class |
AmbiguousResidueUserParam
|
class |
AnalysisParamsCvParam
User: gokelly Date: 11/04/11 Time: 10:25 |
class |
AnalysisParamsUserParam
User: gokelly Date: 11/04/11 Time: 10:25 |
class |
DatabaseNameCvParam
User: gokelly Date: 4/14/11 Time: 2:06 PM |
class |
DatabaseNameUserParam
User: gokelly Date: 4/14/11 Time: 2:06 PM |
class |
DBSequenceCvParam
|
class |
DBSequenceUserParam
|
class |
EnzymeNameCvParam
User: gokelly Date: 11/04/11 Time: 14:10 |
class |
EnzymeNameUserParam
User: gokelly Date: 11/04/11 Time: 14:10 |
class |
ExcludeCvParam
User: gokelly Date: 11/04/11 Time: 16:00 |
class |
ExcludeUserParam
User: gokelly Date: 11/04/11 Time: 16:00 |
class |
FileFormatCvParam
|
class |
FilterTypeCvParam
User: gokelly Date: 4/14/11 Time: 2:09 PM |
class |
FilterTypeUserParam
User: gokelly Date: 4/14/11 Time: 2:09 PM |
class |
IncludeCvParam
User: gokelly Date: 11/04/11 Time: 15:58 |
class |
IncludeUserParam
User: gokelly Date: 11/04/11 Time: 15:59 |
class |
IonTypeCvParam
|
class |
MassTableCvParam
|
class |
MassTableUserParam
|
class |
MeasureCvParam
|
class |
ModificationCvParam
|
class |
ModificationUserParam
|
class |
ModParamCvParam
|
class |
OrganizationCvParam
Created by IntelliJ IDEA. |
class |
OrganizationUserParam
Created by IntelliJ IDEA. |
class |
PeptideCvParam
|
class |
PeptideEvidenceCvParam
|
class |
PeptideEvidenceListCvParam
Created by IntelliJ IDEA. |
class |
PeptideEvidenceListUserParam
Created by IntelliJ IDEA. |
class |
PeptideEvidenceUserParam
|
class |
PeptideUserParam
|
class |
PersonCvParam
Created by IntelliJ IDEA. |
class |
PersonUserParam
Created by IntelliJ IDEA. |
class |
ProteinAmbiguityGroupCvParam
|
class |
ProteinAmbiguityGroupUserParam
|
class |
ProteinDetectionHypothesisCvParam
|
class |
ProteinDetectionHypothesisUserParam
|
class |
ProteinDetectionListCvParam
|
class |
ProteinDetectionListUserParam
|
class |
RoleCvParam
|
class |
SampleCvParam
|
class |
SampleUserParam
|
class |
SearchDatabaseCvParam
|
class |
SearchTypeCvParam
User: gokelly Date: 4/14/11 Time: 2:10 PM |
class |
SearchTypeUserParam
User: gokelly Date: 4/14/11 Time: 2:10 PM |
class |
SoftwareNameCvParam
User: gokelly Date: 4/14/11 Time: 2:08 PM |
class |
SoftwareNameUserParam
User: gokelly Date: 4/14/11 Time: 2:08 PM |
class |
SourceFileCvParam
|
class |
SourceFileUserParam
|
class |
SpecificityRulesCvParam
|
class |
SpectrumIdentificationItemCvParam
|
class |
SpectrumIdentificationItemUserParam
|
class |
SpectrumIdentificationListCvParam
|
class |
SpectrumIdentificationListUserParam
|
class |
SpectrumIdentificationResultCvParam
|
class |
SpectrumIdentificationResultUserParam
|
class |
SpectrumIDFormatCvParam
|
class |
ThresholdCvParam
User: gokelly Date: 11/04/11 Time: 10:23 |
class |
ThresholdUserParam
User: gokelly Date: 11/04/11 Time: 10:24 |
class |
ToleranceCvParam
|
class |
TranslationTableCvParam
|
Uses of AbstractParam in uk.ac.ebi.jmzidml.xml.jaxb.resolver |
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Methods in uk.ac.ebi.jmzidml.xml.jaxb.resolver with parameters of type AbstractParam | |
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void |
AbstractParamUnitCvRefResolver.updateObject(AbstractParam object)
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