FastqPuri
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C_ad_seq | Stores an adapter entry |
C_adapter | |
C_bfilter | Bloom filter structure |
C_bfkmer | Stores a processed kmer (2 bits pro nucleotide) |
C_ds_adap | Structure containing an adapter pair (for read 1 and read 2) |
C_fa_data | Stores sequences of a fasta file |
C_fa_entry | Fasta entry |
C_fq_read | Stores a fastq entry |
C_iparam_makeBloom | MakeBloom input parameters |
C_iparam_makeTree | MakeTree input parameters |
C_iparam_Qreport | Qreport input parameters |
C_iparam_Sreport | Sreport input parameters |
C_iparam_trimFilter | TrimFilter input parameters |
C_node | Node structure: formed out of T_ACGT pointers to Node structure |
C_split | Splitted string and the number or splitted fields |
C_stats_TF | Collects stats info from the filtering procedure |
C_stats_TFDS | Collects stats info from the filtering procedure |
C_tree | Structure containing a T_ACGT-tree |
C_uint128 | |
Cstatsinfo | Stores info needed to create the summary graphs |