FastqPuri
Public Attributes | List of all members
_iparam_Qreport Struct Reference

contains Qreport input parameters More...

#include <init_Qreport.h>

Public Attributes

char * inputfile
 
char outputfilebin [MAX_FILENAME]
 
char outputfilehtml [MAX_FILENAME]
 
char outputfileinfo [MAX_FILENAME]
 
int nQ
 
int ntiles
 
int minQ
 
int read_len
 
int filter
 
int one_read_len
 

Detailed Description

contains Qreport input parameters

Member Data Documentation

◆ filter

int _iparam_Qreport::filter

0 original data, 1 this tool filtered data, 2 other tool filtered data

◆ inputfile

char* _iparam_Qreport::inputfile

Inputfile name

◆ minQ

int _iparam_Qreport::minQ

minimum Quality allowed 0 - 45

◆ nQ

int _iparam_Qreport::nQ

# different quality values (default is 46)

◆ ntiles

int _iparam_Qreport::ntiles

# tiles (default is 96)

◆ one_read_len

int _iparam_Qreport::one_read_len

1 all reads of equal length 0 reads have different lengths.

◆ outputfilebin

char _iparam_Qreport::outputfilebin[MAX_FILENAME]

Binary outputfile name.

◆ outputfilehtml

char _iparam_Qreport::outputfilehtml[MAX_FILENAME]

html outputfile name

◆ outputfileinfo

char _iparam_Qreport::outputfileinfo[MAX_FILENAME]

Info outputfile name

◆ read_len

int _iparam_Qreport::read_len

original read length


The documentation for this struct was generated from the following file: