FastqPuri
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collects stats info from the filtering procedure More...
#include <io_trimFilterDS.h>
Public Attributes | |
int | filters [NFILTERS] |
int | trimmed1 [NFILTERS] |
int | trimmed2 [NFILTERS] |
int | discarded [NFILTERS] |
int | good |
int | nreads |
collects stats info from the filtering procedure
int _stats_TFDS::discarded[NFILTERS] |
# discarded reads: ADAP, CONT, LOWQ, NNNN
int _stats_TFDS::filters[NFILTERS] |
Using filters for: ADAP, CONT, LOWQ, NNNN
int _stats_TFDS::good |
# good reads
int _stats_TFDS::nreads |
total number of reads in the fq file
int _stats_TFDS::trimmed1[NFILTERS] |
# trimmed reads by: ADAP, CONT, LOWQ, NNNN
int _stats_TFDS::trimmed2[NFILTERS] |
# trimmed reads by: ADAP, CONT, LOWQ, NNNN