FastqPuri
init_Qreport.h
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2  * Copyright (C) 2017 by Paula Perez Rubio *
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4  * This file is part of FastqPuri. *
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6  * FastqPuri is free software: you can redistribute it and/or modify *
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14  * GNU General Public License for more details. *
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20 
29 #ifndef INIT_QREPORT_H_
30 #define INIT_QREPORT_H_
31 
32 #include "defines.h"
33 
37 typedef struct _iparam_Qreport {
38  char *inputfile;
42  int nQ;
43  int ntiles;
44  int minQ;
45  int read_len;
46  int filter;
52 
54 
55 void getarg_Qreport(int argc, char **argv);
56 
57 #endif // endif INIT_QREPORT_H_
struct _iparam_Qreport Iparam_Qreport
contains Qreport input parameters
int minQ
Definition: init_Qreport.h:44
char outputfilebin[MAX_FILENAME]
Definition: init_Qreport.h:39
char outputfileinfo[MAX_FILENAME]
Definition: init_Qreport.h:41
int ntiles
Definition: init_Qreport.h:43
char * inputfile
Definition: init_Qreport.h:38
int filter
Definition: init_Qreport.h:46
int nQ
Definition: init_Qreport.h:42
char outputfilehtml[MAX_FILENAME]
Definition: init_Qreport.h:40
#define MAX_FILENAME
Definition: defines.h:37
Macro definitions.
void printHelpDialog_Qreport()
Function that prints Qreport help dialog when called.
Definition: init_Qreport.c:43
int one_read_len
Definition: init_Qreport.h:49
contains Qreport input parameters
Definition: init_Qreport.h:37
void getarg_Qreport(int argc, char **argv)
Reads in the arguments passed through the command line to Qreport. and stores them in the global vari...
Definition: init_Qreport.c:70
int read_len
Definition: init_Qreport.h:45