FastqPuri
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_stats_TFDS Struct Reference

collects stats info from the filtering procedure More...

#include <io_trimFilterDS.h>

Public Attributes

int filters [NFILTERS]
 
int trimmed1 [NFILTERS]
 
int trimmed2 [NFILTERS]
 
int discarded [NFILTERS]
 
int good
 
int nreads
 

Detailed Description

collects stats info from the filtering procedure

Member Data Documentation

◆ discarded

int _stats_TFDS::discarded[NFILTERS]

# discarded reads: ADAP, CONT, LOWQ, NNNN

◆ filters

int _stats_TFDS::filters[NFILTERS]

Using filters for: ADAP, CONT, LOWQ, NNNN

◆ good

int _stats_TFDS::good

# good reads

◆ nreads

int _stats_TFDS::nreads

total number of reads in the fq file

◆ trimmed1

int _stats_TFDS::trimmed1[NFILTERS]

# trimmed reads by: ADAP, CONT, LOWQ, NNNN

◆ trimmed2

int _stats_TFDS::trimmed2[NFILTERS]

# trimmed reads by: ADAP, CONT, LOWQ, NNNN


The documentation for this struct was generated from the following file: