29 #ifndef IO_TRIMFILTER_H_ 30 #define IO_TRIMFILTER_H_ 46 void buffer_output(FILE *fout,
const char *a,
const int len,
const int fd_i);
50 #endif // IO_TRIMFILTER_H_ int nreads
Definition: io_trimFilter.h:43
int filters[NFILTERS]
Definition: io_trimFilter.h:39
collects stats info from the filtering procedure
Definition: io_trimFilter.h:38
int trimmed[NFILTERS]
Definition: io_trimFilter.h:40
#define NFILTERS
Definition: defines.h:128
void write_summary_TF(Stats_TF tf_stats, char *filename)
writes stats of filtering to summary file (binary)
Definition: io_trimFilter.c:62
int discarded[NFILTERS]
Definition: io_trimFilter.h:41
void buffer_output(FILE *fout, const char *a, const int len, const int fd_i)
buffers the output before writing to disk, writes out summary
Definition: io_trimFilter.c:44
int good
Definition: io_trimFilter.h:42
struct _stats_TF Stats_TF
collects stats info from the filtering procedure