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R

REACTION_LABEL_HEIGHT - Static variable in interface edu.ucsd.sbrg.escher.utilities.EscherOptions
This option allows you to specify the height of labels for reactions.
REACTION_NODE_RATIO - Static variable in interface edu.ucsd.sbrg.escher.utilities.EscherOptions
This value is used as a conversion factor to determine the size of the reaction display box depending on the size of primary nodes.
reactionId - Variable in class edu.ucsd.sbrg.escher.converters.SBGN2Escher
Generated reaction ids.
reactions() - Method in class edu.ucsd.sbrg.escher.model.EscherMap
 
removeBasePoint1() - Method in class edu.ucsd.sbrg.escher.model.Segment
 
removeBasePoint2() - Method in class edu.ucsd.sbrg.escher.model.Segment
 
removeNode(String) - Method in class edu.ucsd.sbrg.escher.model.EscherMap
Removes node from EscherMap.nodes.
removeSegment(String) - Method in class edu.ucsd.sbrg.escher.model.EscherReaction
 
resolveCompartmentCode(String) - Method in class edu.ucsd.sbrg.escher.converters.Escher2Standard
 
reverse(Segment) - Method in class edu.ucsd.sbrg.escher.converters.Escher2Standard
Inverses the given segment in place.
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