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REACTION_LABEL_HEIGHT
- Static variable in interface edu.ucsd.sbrg.escher.utilities.
EscherOptions
This option allows you to specify the height of labels for reactions.
REACTION_NODE_RATIO
- Static variable in interface edu.ucsd.sbrg.escher.utilities.
EscherOptions
This value is used as a conversion factor to determine the size of the reaction display box depending on the size of primary nodes.
reactionId
- Variable in class edu.ucsd.sbrg.escher.converters.
SBGN2Escher
Generated reaction ids.
reactions()
- Method in class edu.ucsd.sbrg.escher.model.
EscherMap
removeBasePoint1()
- Method in class edu.ucsd.sbrg.escher.model.
Segment
removeBasePoint2()
- Method in class edu.ucsd.sbrg.escher.model.
Segment
removeNode(String)
- Method in class edu.ucsd.sbrg.escher.model.
EscherMap
Removes node from
EscherMap.nodes
.
removeSegment(String)
- Method in class edu.ucsd.sbrg.escher.model.
EscherReaction
resolveCompartmentCode(String)
- Method in class edu.ucsd.sbrg.escher.converters.
Escher2Standard
reverse(Segment)
- Method in class edu.ucsd.sbrg.escher.converters.
Escher2Standard
Inverses the given segment in place.
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