Package | Description |
---|---|
edu.ucsd.sbrg.escher.converter |
Provides converters for Escher JSON to community standards (SBGN, SBML) and vice-versa.
|
edu.ucsd.sbrg.escher.model |
Represents model classes for representation of Escher's components.
|
Modifier and Type | Method and Description |
---|---|
EscherReaction |
SBGN2Escher.createReaction(org.sbgn.bindings.Glyph glyph)
Create an
EscherReaction from an SBGN-ML Glyph . |
protected EscherReaction |
SBML2Escher.createReaction(org.sbml.jsbml.ext.layout.ReactionGlyph reactionGlyph)
Creates an
EscherReaction from a ReactionGlyph . |
Modifier and Type | Method and Description |
---|---|
EscherReaction |
EscherReaction.clone() |
EscherReaction |
EscherMap.getReaction(String id) |
Modifier and Type | Method and Description |
---|---|
Map<String,EscherReaction> |
EscherMap.getReactions() |
Set<EscherReaction> |
EscherMap.getReactions(String biggId) |
Set<Map.Entry<String,EscherReaction>> |
EscherMap.reactions() |
Modifier and Type | Method and Description |
---|---|
void |
EscherMap.addReaction(EscherReaction reaction) |
Modifier and Type | Method and Description |
---|---|
void |
EscherMap.setReactions(Map<String,EscherReaction> reactions) |
Constructor and Description |
---|
EscherReaction(EscherReaction escherReaction) |
Copyright © 2015–2019 University of Tübingen. All rights reserved.