Residue Type Class This class has a nested enum for different residues types. Supported residues types are:
standard as
ALA, ARG, ASN, ASP, CYS, GLN, GLU, GLY, HIS, ILE, LEU, LYS, MET, PHE,
PRO, SER, THR, TRP, TYR, VAL
modified standard as
ASZ, ASH - neutral ASP
GLZ, GLH - neutral GLU
HID - neutral HIS, H at ND1, converted to HIS
HIE - neutral HIS, H at NE2
HIP - positive HIS
LYZ, LYN - neutral LYS
CYM - negative CYS
CYX - half cystine, CYS in disulfide bridges
TYM - negative TYR
N and C terminus
AMN - N-terminus ammonium
AMI - N-terminus amin
CXL - C-terminus carboxylate
CXC - C-terminus carbon acid
UNK - unspecified type.
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#include <residuetype.hpp>
List of all members.
Detailed Description
Residue Type Class This class has a nested enum for different residues types. Supported residues types are:
standard as
ALA, ARG, ASN, ASP, CYS, GLN, GLU, GLY, HIS, ILE, LEU, LYS, MET, PHE,
PRO, SER, THR, TRP, TYR, VAL
modified standard as
ASZ, ASH - neutral ASP
GLZ, GLH - neutral GLU
HID - neutral HIS, H at ND1, converted to HIS
HIE - neutral HIS, H at NE2
HIP - positive HIS
LYZ, LYN - neutral LYS
CYM - negative CYS
CYX - half cystine, CYS in disulfide bridges
TYM - negative TYR
N and C terminus
AMN - N-terminus ammonium
AMI - N-terminus amin
CXL - C-terminus carboxylate
CXC - C-terminus carbon acid
UNK - unspecified type.
The documentation for this class was generated from the following file:
- /home/martin/phoenix/mgraph/residuetype.hpp