Subroutine Coverage
lib/Sanger/CGP/TraFiC/Cluster.pm |
|
Criterion |
Covered |
Total |
% |
subroutine |
20 |
21 |
95.2
|
pod |
5 |
12 |
41.6
|
line |
count |
pod |
subroutine |
35
|
2 |
n/a |
BEGIN |
36
|
2 |
n/a |
BEGIN |
37
|
2 |
n/a |
BEGIN |
38
|
2 |
n/a |
BEGIN |
39
|
2 |
n/a |
BEGIN |
40
|
2 |
n/a |
BEGIN |
41
|
2 |
n/a |
BEGIN |
43
|
2 |
n/a |
BEGIN |
52
|
2 |
Yes |
new |
61
|
0 |
Yes |
reciprocal_clusters |
70
|
1 |
No |
reciprocal_hits |
95
|
1 |
No |
output_reciprocal |
140
|
2 |
No |
compare_hits |
168
|
2 |
No |
clustered_struct |
185
|
2 |
Yes |
cluster_hits |
192
|
8 |
No |
cluster_file |
219
|
102408 |
No |
finalise_cluster |
244
|
170 |
n/a |
_format_readnames |
253
|
6 |
Yes |
set_min_reads |
259
|
2 |
No |
set_paired_alu |
265
|
1 |
Yes |
set_input_output |