dasp.model
Class ActiveSiteSignature
java.lang.Object
dasp.model.ActiveSiteSignature
public class ActiveSiteSignature
- extends Object
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
ActiveSiteSignature
public ActiveSiteSignature(String inputString)
throws IOException
- Throws:
IOException
ActiveSiteSignature
public ActiveSiteSignature(DaspStructure struct,
List<Residue> residues)
getSignature
public String getSignature(int profileRadius)
getPdbId
public String getPdbId()
getFragmentsInContext
public String getFragmentsInContext()
dist
public double dist(Residue r1,
Residue r2)
- Calculates the Euclidean distance between two residue centers
- Parameters:
r1
- First residuer2
- Second residue
- Returns:
- the Euclidean distance between the 2 residue centers as a double value.
main
public static void main(String[] args)