The model contains one compartment called C. There are two species called S1 and S2 and two parameters called k1 and k2. The model contains one reaction defined as:
Reaction | Rate |
S1 → S2 | C · k1 · S1 |
The model contains one initialAssignment:
Variable | Formula |
C | k210 |
Note: SBML's InitialAssignment construct override any declared initial values. In this case the initial value declared for compartment C is consistent with the value returned by the InitialAssignment.
The initial conditions are as follows:
Value | Units | |
Initial amount of S1 | 1 | mole |
Initial amount of S2 | 1.5 | mole |
Value of parameter k1 | 0.5 | second-1 |
Value of parameter k2 | 50 | litre |
Volume of compartment C | 5 | litre |
The species values are given as amounts of substance to make it easier to use the model in a discrete stochastic simulator, but (as per usual SBML principles) they must be treated as concentrations where they appear in expressions.