The model contains one compartment called C. There are two species called S1 and S2 and one parameter called k1. Species S2 is labeled as an SBML boundary species. The model contains one reaction:
Reaction | Rate |
S1 → S2 | k1 · S1 · C · t |
where the symbol 't' denotes the current simulation time.
The initial conditions are as follows:
Value | Units | |
Initial amount of S1 | 1.5 × 10−4 | mole |
Initial amount of S2 | 0 | mole |
Value of parameter k1 | 1 | second-2 |
Volume of compartment C | 1 | litre |
The species' initial quantities are given in terms of substance units to make it easier to use the model in a discrete stochastic simulator, but (as per usual SBML principles) their symbols represent their values in concentration units where they appear in expressions.
Note: The test data for this model was generated from an analytical solution of the system of equations.