The model contains one compartment called C. There are four species called X0, X1, T and S1 and three parameters called k1, k2 and k3. The model contains two reactions defined as:
Reaction | Rate |
X0 → T | C · k1 · X0 |
T → X1 | C · k2 · S1 |
The model contains one rule:
Type | Variable | Formula |
Algebraic | n/a | multiply((1 + k3), S1) − T |
The rule applies the functionDefinition defined as:
Id | Arguments | Formula |
multiply | x, y | x · y |
The initial conditions are as follows:
Value | Units | |
Initial amount of X0 | 1 | mole |
Initial amount of X1 | 0 | mole |
Initial amount of T | 0 | mole |
Initial amount of S1 | 0 | mole |
Value of parameter k1 | 0.1 | second-1 |
Value of parameter k2 | 0.375 | second-1 |
Value of parameter k3 | 2.5 | dimensionless |
Volume of compartment C | 1 | litre |
The species values are given as amounts of substance to make it easier to use the model in a discrete stochastic simulator, but (as per usual SBML principles) their symbols represent their values in concentration units where they appear in expressions.